Dca57477.1
Annotation
- 3-exons
- f-1
- sp|A5AV98_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#ORFNames=VITISV_015928#GO:0003676;GO:0008270;GO:0015074#2F1P0C
- Os08t0125300-01 Integrase, catalytic core domain containing protein.
- Repeat List (scaffold827)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca57477.1 |
3 |
175 |
196 |
62.24 |
173 |
58 |
5e-64
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|A5AV98_VITVI |
415 |
628 |
764 |
28.01 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca57477.1 |
3 |
156 |
196 |
29.59 |
154 |
30 |
1e-21
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| Os08t0125300-01 |
581 |
767 |
1428 |
13.09 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold827 |
Augustus |
mRNA |
1875 |
3173 |
. |
+ |
. |
ID=Dca57477.1;Parent=Dca57477 |
| scaffold827 |
Augustus |
exon |
1875 |
1881 |
. |
+ |
. |
ID=Dca57477.1.exon1;Parent=Dca57477.1 |
| scaffold827 |
Augustus |
exon |
2467 |
2700 |
. |
+ |
. |
ID=Dca57477.1.exon2;Parent=Dca57477.1 |
| scaffold827 |
Augustus |
exon |
2824 |
3173 |
. |
+ |
. |
ID=Dca57477.1.exon3;Parent=Dca57477.1 |
