Carnation DB

Dca5748.1

Annotation

12-exons
f-1
sp|B9GRB9_POPTR#Predicted protein#Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp trichocarpa)#ORFNames=POPTRDRAFT_816969#GO:0030170;GO:0006520#1F1P0C
AT2G20340.1 | Symbols: | Pyridoxal phosphate (PLP)-dependent transferases superfamily protein | chr2:8779804-8782490 FORWARD LENGTH=490
Repeat List (scaffold1221)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca5748.1	1	480	480	77.08	480	78	0
Target_name	Start	End	Length	Cov(%)
sp\|B9GRB9_POPTR	1	480	480	100

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca5748.1	1	477	480	73.12	477	74	0
Target_name	Start	End	Length	Cov(%)
AT2G20340.1	12	488	490	97.34

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold1221	Augustus	mRNA	26001	30253	.	+	.	ID=Dca5748.1;Parent=Dca5748
scaffold1221	Augustus	exon	26001	26102	.	+	.	ID=Dca5748.1.exon1;Parent=Dca5748.1
scaffold1221	Augustus	exon	27977	28049	.	+	.	ID=Dca5748.1.exon2;Parent=Dca5748.1
scaffold1221	Augustus	exon	28130	28360	.	+	.	ID=Dca5748.1.exon3;Parent=Dca5748.1
scaffold1221	Augustus	exon	28434	28597	.	+	.	ID=Dca5748.1.exon4;Parent=Dca5748.1
scaffold1221	Augustus	exon	28711	28851	.	+	.	ID=Dca5748.1.exon5;Parent=Dca5748.1
scaffold1221	Augustus	exon	28940	28999	.	+	.	ID=Dca5748.1.exon6;Parent=Dca5748.1
scaffold1221	Augustus	exon	29096	29260	.	+	.	ID=Dca5748.1.exon7;Parent=Dca5748.1
scaffold1221	Augustus	exon	29351	29407	.	+	.	ID=Dca5748.1.exon8;Parent=Dca5748.1
scaffold1221	Augustus	exon	29509	29573	.	+	.	ID=Dca5748.1.exon9;Parent=Dca5748.1
scaffold1221	Augustus	exon	29663	29786	.	+	.	ID=Dca5748.1.exon10;Parent=Dca5748.1
scaffold1221	Augustus	exon	29866	30003	.	+	.	ID=Dca5748.1.exon11;Parent=Dca5748.1
scaffold1221	Augustus	exon	30131	30253	.	+	.	ID=Dca5748.1.exon12;Parent=Dca5748.1