Carnation DB

Dca57502.1

Annotation

5-exons
f-1
sp|B9I1Q5_POPTR#Predicted protein#Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp trichocarpa)#ORFNames=POPTRDRAFT_235452#GO:0016020;GO:0055085#0F1P1C
AT2G17010.1 | Symbols: | Mechanosensitive ion channel family protein | chr2:7392914-7395970 REVERSE LENGTH=779
Repeat List (scaffold828)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca57502.1	6	358	379	62	353	67	2e-139
Target_name	Start	End	Length	Cov(%)
sp\|B9I1Q5_POPTR	195	546	555	63.42

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca57502.1	2	362	379	60.94	361	63	2e-136
Target_name	Start	End	Length	Cov(%)
AT2G17010.1	411	776	779	46.98

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold828	Augustus	mRNA	28107	29907	.	+	.	ID=Dca57502.1;Parent=Dca57502
scaffold828	Augustus	exon	28107	28312	.	+	.	ID=Dca57502.1.exon1;Parent=Dca57502.1
scaffold828	Augustus	exon	28416	28539	.	+	.	ID=Dca57502.1.exon2;Parent=Dca57502.1
scaffold828	Augustus	exon	28654	28947	.	+	.	ID=Dca57502.1.exon3;Parent=Dca57502.1
scaffold828	Augustus	exon	29254	29456	.	+	.	ID=Dca57502.1.exon4;Parent=Dca57502.1
scaffold828	Augustus	exon	29595	29907	.	+	.	ID=Dca57502.1.exon5;Parent=Dca57502.1