Carnation DB

Dca57509.1

Annotation

12-exons
f-1
sp|D7TQT9_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#OrderedLocusNames=VIT_08s0040g00970#unknown#0F0P0C
AT2G40820.1 | Symbols: | FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: myosin heavy chain-related (TAIR:AT3G56480.1); Has 203 Blast hits to 195 proteins in 64 species: Archae - 3; Bacteria - 13; Metazoa - 26; Fungi - 15; Plants - 101; Viruses - 0; Other Eukaryotes - 45 (source: NCBI BLink). | chr2:17036768-17039474 REVERSE LENGTH=492
Repeat List (scaffold828)

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca57509.1	1	490	491	71.48	490	72	0
Target_name	Start	End	Length	Cov(%)
sp\|D7TQT9_VITVI	1	490	491	99.79

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca57509.1	1	489	491	60.28	489	61	3e-175
Target_name	Start	End	Length	Cov(%)
AT2G40820.1	1	492	492	100

seqname	source	feature	start	end	score	strand	frame	group
scaffold828	Augustus	mRNA	78416	81111	.	+	.	ID=Dca57509.1;Parent=Dca57509
scaffold828	Augustus	exon	78416	78700	.	+	.	ID=Dca57509.1.exon1;Parent=Dca57509.1
scaffold828	Augus-PASA	exon	78785	78913	.	+	.	ID=Dca57509.1.exon2;Parent=Dca57509.1
scaffold828	Augus-PASA	exon	79099	79191	.	+	.	ID=Dca57509.1.exon3;Parent=Dca57509.1
scaffold828	Augus-PASA	exon	79287	79427	.	+	.	ID=Dca57509.1.exon4;Parent=Dca57509.1
scaffold828	Augustus	exon	79538	79606	.	+	.	ID=Dca57509.1.exon5;Parent=Dca57509.1
scaffold828	Augustus	exon	79698	79781	.	+	.	ID=Dca57509.1.exon6;Parent=Dca57509.1
scaffold828	Augustus	exon	79872	80052	.	+	.	ID=Dca57509.1.exon7;Parent=Dca57509.1
scaffold828	Augustus	exon	80132	80248	.	+	.	ID=Dca57509.1.exon8;Parent=Dca57509.1
scaffold828	Augustus	exon	80341	80399	.	+	.	ID=Dca57509.1.exon9;Parent=Dca57509.1
scaffold828	Augustus	exon	80533	80667	.	+	.	ID=Dca57509.1.exon10;Parent=Dca57509.1
scaffold828	Augustus	exon	80789	80938	.	+	.	ID=Dca57509.1.exon11;Parent=Dca57509.1
scaffold828	Augustus	exon	81079	81111	.	+	.	ID=Dca57509.1.exon12;Parent=Dca57509.1