Dca57524.1
Annotation
- 3-exons
- f-1
- sp|D3IVU0_9POAL#Putative retrotransposon protein#Phyllostachys edulis#unknown#GO:0003676;GO:0008270;GO:0015074#2F1P0C
- Repeat List (scaffold8287)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca57524.1 |
34 |
300 |
540 |
16.66 |
267 |
33 |
3e-31
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|D3IVU0_9POAL |
23 |
281 |
896 |
28.9 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca57524.1 |
309 |
519 |
540 |
14.25 |
211 |
32 |
2e-24
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| Os11t0656500-01 |
1140 |
1378 |
1401 |
17.05 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold8287 |
Augustus |
mRNA |
380 |
4372 |
. |
- |
. |
ID=Dca57524.1;Parent=Dca57524 |
| scaffold8287 |
Augustus |
exon |
380 |
849 |
. |
- |
. |
ID=Dca57524.1.exon1;Parent=Dca57524.1 |
| scaffold8287 |
Augustus |
exon |
961 |
1191 |
. |
- |
. |
ID=Dca57524.1.exon2;Parent=Dca57524.1 |
| scaffold8287 |
Augustus |
exon |
3451 |
4372 |
. |
- |
. |
ID=Dca57524.1.exon3;Parent=Dca57524.1 |
