Carnation DB

Dca57549.1

Annotation

10-exons
f-1
sp|G9FIF2_BETVU#Putative uncharacterized protein#Beta vulgaris (Sugar beet)#unknown#GO:0004190;GO:0003723;GO:0003964;GO:0008270;GO:0015074;GO:0006508;GO:0006278#4F3P0C
sp|A2I5E5_BETVU#Retrotransposon protein#Beta vulgaris (Sugar beet)#unknown#GO:0003723;GO:0003964;GO:0008270;GO:0015074;GO:0006278#3F2P0C
Repeat List (scaffold8296)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca57549.1	226	658	1311	22.19	433	68	1e-176
Target_name	Start	End	Length	Cov(%)
sp\|G9FIF2_BETVU	465	898	1553	27.94

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca57549.1	226	718	1311	15.25	493	38	2e-95
Target_name	Start	End	Length	Cov(%)
Os12t0142900-02	119	641	707	73.97

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold8296	Augustus	mRNA	11426	22673	.	+	.	ID=Dca57549.1;Parent=Dca57549
scaffold8296	Augustus	exon	11426	11884	.	+	.	ID=Dca57549.1.exon1;Parent=Dca57549.1
scaffold8296	Augustus	exon	14066	14279	.	+	.	ID=Dca57549.1.exon2;Parent=Dca57549.1
scaffold8296	Augustus	exon	14481	15779	.	+	.	ID=Dca57549.1.exon3;Parent=Dca57549.1
scaffold8296	Augustus	exon	19655	20520	.	+	.	ID=Dca57549.1.exon4;Parent=Dca57549.1
scaffold8296	Augustus	exon	20608	20769	.	+	.	ID=Dca57549.1.exon5;Parent=Dca57549.1
scaffold8296	Augustus	exon	20872	21000	.	+	.	ID=Dca57549.1.exon6;Parent=Dca57549.1
scaffold8296	Augustus	exon	21081	21428	.	+	.	ID=Dca57549.1.exon7;Parent=Dca57549.1
scaffold8296	Augustus	exon	21524	21676	.	+	.	ID=Dca57549.1.exon8;Parent=Dca57549.1
scaffold8296	Augustus	exon	22043	22195	.	+	.	ID=Dca57549.1.exon9;Parent=Dca57549.1
scaffold8296	Augustus	exon	22521	22673	.	+	.	ID=Dca57549.1.exon10;Parent=Dca57549.1