Carnation DB

Dca57562.1

Annotation

5-exons
f-1
sp|D7SVT4_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#OrderedLocusNames=VIT_07s0031g00180#GO:0003676;GO:0000166#2F0P0C
AT2G42240.2 | Symbols: | RNA-binding (RRM/RBD/RNP motifs) family protein | chr2:17596844-17598911 FORWARD LENGTH=302
Repeat List (scaffold83)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca57562.1	37	163	218	41.74	127	72	2e-44
Target_name	Start	End	Length	Cov(%)
sp\|D7SVT4_VITVI	76	201	333	37.83

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca57562.1	37	202	218	40.36	166	54	3e-34
Target_name	Start	End	Length	Cov(%)
AT2G42240.2	48	203	302	51.65

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold83	Augustus	mRNA	89524	91207	.	+	.	ID=Dca57562.1;Parent=Dca57562
scaffold83	Augustus	exon	89524	89757	.	+	.	ID=Dca57562.1.exon1;Parent=Dca57562.1
scaffold83	Augustus	exon	89869	89931	.	+	.	ID=Dca57562.1.exon2;Parent=Dca57562.1
scaffold83	Augustus	exon	90538	90622	.	+	.	ID=Dca57562.1.exon3;Parent=Dca57562.1
scaffold83	Augustus	exon	90714	90785	.	+	.	ID=Dca57562.1.exon4;Parent=Dca57562.1
scaffold83	Augustus	exon	91005	91207	.	+	.	ID=Dca57562.1.exon5;Parent=Dca57562.1