Carnation DB

Dca57567.1

Annotation

8-exons
f-1
sp|B9HH95_POPTR#Predicted protein#Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp trichocarpa)#ORFNames=POPTRDRAFT_655110#GO:0003676;GO:0000166#2F0P0C
sp|B9T820_RICCO#RNA binding protein, putative#Ricinus communis (Castor bean)#ORFNames=RCOM_0250010#GO:0003676;GO:0000166#2F0P0C
Repeat List (scaffold83)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca57567.1	34	240	243	55.96	207	54	9e-65
Target_name	Start	End	Length	Cov(%)
sp\|B9HH95_POPTR	69	320	323	78.01

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca57567.1	37	231	243	47.73	195	49	2e-50
Target_name	Start	End	Length	Cov(%)
AT2G42240.2	48	280	302	77.15

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold83	Augus-PASA	mRNA	128161	131310	.	+	.	ID=Dca57567.1;Parent=Dca57567
scaffold83	Augus-PASA	exon	128161	128394	.	+	.	ID=Dca57567.1.exon1;Parent=Dca57567.1
scaffold83	Augus-PASA	exon	128506	128568	.	+	.	ID=Dca57567.1.exon2;Parent=Dca57567.1
scaffold83	Augus-PASA	exon	129175	129259	.	+	.	ID=Dca57567.1.exon3;Parent=Dca57567.1
scaffold83	Augus-PASA	exon	129351	129422	.	+	.	ID=Dca57567.1.exon4;Parent=Dca57567.1
scaffold83	Augus-PASA	exon	129641	129719	.	+	.	ID=Dca57567.1.exon5;Parent=Dca57567.1
scaffold83	Augustus	exon	130529	130598	.	+	.	ID=Dca57567.1.exon6;Parent=Dca57567.1
scaffold83	Augustus	exon	130865	130950	.	+	.	ID=Dca57567.1.exon7;Parent=Dca57567.1
scaffold83	Augustus	exon	131268	131310	.	+	.	ID=Dca57567.1.exon8;Parent=Dca57567.1