Carnation DB

Dca57669.1

Annotation

7-exons
f-1
sp|F6H771_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#OrderedLocusNames=VIT_16s0098g00900#GO:0000156;GO:0006355#1F1P0C
sp|B9IDF0_POPTR#Pseudo response regulator#Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp trichocarpa)#Name=PtpRR3#GO:0000156;GO:0006355#1F1P0C
Repeat List (scaffold833)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca57669.1	11	583	597	50.25	573	46	3e-134
Target_name	Start	End	Length	Cov(%)
sp\|F6H771_VITVI	22	677	688	95.34

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca57669.1	497	574	597	8.54	78	63	1e-17
Target_name	Start	End	Length	Cov(%)
Os09t0532400-02	540	616	624	12.33

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold833	Augustus	mRNA	86106	89806	.	-	.	ID=Dca57669.1;Parent=Dca57669
scaffold833	Augustus	exon	86106	86246	.	-	.	ID=Dca57669.1.exon1;Parent=Dca57669.1
scaffold833	Augustus	exon	86334	86892	.	-	.	ID=Dca57669.1.exon2;Parent=Dca57669.1
scaffold833	Augustus	exon	86991	87469	.	-	.	ID=Dca57669.1.exon3;Parent=Dca57669.1
scaffold833	Augustus	exon	87568	87726	.	-	.	ID=Dca57669.1.exon4;Parent=Dca57669.1
scaffold833	Augus-PASA	exon	87813	87943	.	-	.	ID=Dca57669.1.exon5;Parent=Dca57669.1
scaffold833	Augus-PASA	exon	88028	88189	.	-	.	ID=Dca57669.1.exon6;Parent=Dca57669.1
scaffold833	Augus-PASA	exon	89644	89806	.	-	.	ID=Dca57669.1.exon7;Parent=Dca57669.1