Carnation DB

Dca57693.1

Annotation

12-exons
f-1
sp|B9HUQ7_POPTR#Predicted protein#Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp trichocarpa)#ORFNames=POPTRDRAFT_769259#GO:0005634;GO:0005524;GO:0008094;GO:0007131#2F1P1C
sp|B9RTJ3_RICCO#Meiotic recombination protein dmc1, putative#Ricinus communis (Castor bean)#ORFNames=RCOM_0910960#GO:0005634;GO:0005524;GO:0003677;GO:0008094;GO:0007131#3F1P1C
Repeat List (scaffold8343)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca57693.1	4	318	318	80.18	315	77	7e-147
Target_name	Start	End	Length	Cov(%)
sp\|B9HUQ7_POPTR	1	332	352	94.31

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca57693.1	4	315	318	79.87	312	77	2e-139
Target_name	Start	End	Length	Cov(%)
AT3G22880.1	2	330	344	95.63

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold8343	Augustus	mRNA	8167	11680	.	-	.	ID=Dca57693.1;Parent=Dca57693
scaffold8343	Augustus	exon	8167	8345	.	-	.	ID=Dca57693.1.exon1;Parent=Dca57693.1
scaffold8343	Augustus	exon	8450	8528	.	-	.	ID=Dca57693.1.exon2;Parent=Dca57693.1
scaffold8343	Augustus	exon	8634	8702	.	-	.	ID=Dca57693.1.exon3;Parent=Dca57693.1
scaffold8343	Augustus	exon	8798	8890	.	-	.	ID=Dca57693.1.exon4;Parent=Dca57693.1
scaffold8343	Augustus	exon	8973	9039	.	-	.	ID=Dca57693.1.exon5;Parent=Dca57693.1
scaffold8343	Augustus	exon	9146	9207	.	-	.	ID=Dca57693.1.exon6;Parent=Dca57693.1
scaffold8343	Augustus	exon	9570	9615	.	-	.	ID=Dca57693.1.exon7;Parent=Dca57693.1
scaffold8343	Augustus	exon	10066	10154	.	-	.	ID=Dca57693.1.exon8;Parent=Dca57693.1
scaffold8343	Augustus	exon	10253	10324	.	-	.	ID=Dca57693.1.exon9;Parent=Dca57693.1
scaffold8343	Augustus	exon	10430	10521	.	-	.	ID=Dca57693.1.exon10;Parent=Dca57693.1
scaffold8343	Augustus	exon	11404	11489	.	-	.	ID=Dca57693.1.exon11;Parent=Dca57693.1
scaffold8343	Augustus	exon	11658	11680	.	-	.	ID=Dca57693.1.exon12;Parent=Dca57693.1