Carnation DB

Dca57835.1

Annotation

13-exons
f-1
sp|B9HFF0_POPTR#Predicted protein#Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp trichocarpa)#ORFNames=POPTRDRAFT_1082525#GO:0005524;GO:0031072;GO:0046872;GO:0051082;GO:0006457;GO:0009408#4F2P0C
sp|B9T7J3_RICCO#Chaperone protein DNAj, putative#Ricinus communis (Castor bean)#ORFNames=RCOM_0219890#GO:0005524;GO:0031072;GO:0046872;GO:0051082;GO:0006457;GO:0009408#4F2P0C
Repeat List (scaffold84)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca57835.1	209	647	648	48.3	439	71	0
Target_name	Start	End	Length	Cov(%)
sp\|B9HFF0_POPTR	1	441	441	100

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca57835.1	212	648	648	47.22	437	70	9e-172
Target_name	Start	End	Length	Cov(%)
AT2G22360.1	8	442	442	98.41

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold84	Augustus	mRNA	40528	47972	.	-	.	ID=Dca57835.1;Parent=Dca57835
scaffold84	Augustus	exon	40528	41382	.	-	.	ID=Dca57835.1.exon1;Parent=Dca57835.1
scaffold84	Augustus	exon	41474	41554	.	-	.	ID=Dca57835.1.exon2;Parent=Dca57835.1
scaffold84	Augustus	exon	41682	41730	.	-	.	ID=Dca57835.1.exon3;Parent=Dca57835.1
scaffold84	Augustus	exon	42942	42984	.	-	.	ID=Dca57835.1.exon4;Parent=Dca57835.1
scaffold84	Augustus	exon	44239	44296	.	-	.	ID=Dca57835.1.exon5;Parent=Dca57835.1
scaffold84	Augustus	exon	44403	44544	.	-	.	ID=Dca57835.1.exon6;Parent=Dca57835.1
scaffold84	Augustus	exon	45233	45337	.	-	.	ID=Dca57835.1.exon7;Parent=Dca57835.1
scaffold84	Augustus	exon	45539	45641	.	-	.	ID=Dca57835.1.exon8;Parent=Dca57835.1
scaffold84	Augustus	exon	46528	46695	.	-	.	ID=Dca57835.1.exon9;Parent=Dca57835.1
scaffold84	Augustus	exon	47323	47393	.	-	.	ID=Dca57835.1.exon10;Parent=Dca57835.1
scaffold84	Augustus	exon	47480	47562	.	-	.	ID=Dca57835.1.exon11;Parent=Dca57835.1
scaffold84	Augustus	exon	47673	47744	.	-	.	ID=Dca57835.1.exon12;Parent=Dca57835.1
scaffold84	Augustus	exon	47856	47972	.	-	.	ID=Dca57835.1.exon13;Parent=Dca57835.1