Carnation DB

Dca57845.1

Annotation

7-exons
f-1
sp|D7LKY4_ARALL#Putative uncharacterized protein#Arabidopsis lyrata subsp lyrata (Lyre-leaved rock-cress)#ORFNames=ARALYDRAFT_483552#GO:0005737;GO:0005524;GO:0000049;GO:0034227#2F1P1C
AT2G44270.2 | Symbols: ROL5 | repressor of lrx1 | chr2:18298078-18300153 REVERSE LENGTH=358
Repeat List (scaffold84)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca57845.1	196	286	286	24.12	91	75	2e-33
Target_name	Start	End	Length	Cov(%)
sp\|D7LKY4_ARALL	263	355	355	26.19

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca57845.1	196	286	286	24.12	91	75	3e-34
Target_name	Start	End	Length	Cov(%)
AT2G44270.2	266	358	358	25.97

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold84	Augustus	mRNA	141364	144809	.	+	.	ID=Dca57845.1;Parent=Dca57845
scaffold84	Augustus	exon	141364	141459	.	+	.	ID=Dca57845.1.exon1;Parent=Dca57845.1
scaffold84	Augustus	exon	141675	141789	.	+	.	ID=Dca57845.1.exon2;Parent=Dca57845.1
scaffold84	Augustus	exon	142315	142457	.	+	.	ID=Dca57845.1.exon3;Parent=Dca57845.1
scaffold84	Augustus	exon	142551	142670	.	+	.	ID=Dca57845.1.exon4;Parent=Dca57845.1
scaffold84	Augustus	exon	142801	142913	.	+	.	ID=Dca57845.1.exon5;Parent=Dca57845.1
scaffold84	Augustus	exon	144068	144179	.	+	.	ID=Dca57845.1.exon6;Parent=Dca57845.1
scaffold84	Augustus	exon	144648	144809	.	+	.	ID=Dca57845.1.exon7;Parent=Dca57845.1