Carnation DB

Dca57847.1

Annotation

7-exons
f-1
sp|D7KTA4_ARALL#Putative uncharacterized protein#Arabidopsis lyrata subsp lyrata (Lyre-leaved rock-cress)#ORFNames=ARALYDRAFT_895494#GO:0005507;GO:0016491#2F0P0C
AT1G76160.1 | Symbols: sks5 | SKU5 similar 5 | chr1:28578211-28581020 REVERSE LENGTH=541
Repeat List (scaffold84)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca57847.1	28	551	552	80.43	524	85	0
Target_name	Start	End	Length	Cov(%)
sp\|D7KTA4_ARALL	18	541	541	96.85

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca57847.1	28	551	552	79.16	524	84	0
Target_name	Start	End	Length	Cov(%)
AT1G76160.1	18	541	541	96.85

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold84	Augus-PASA	mRNA	151002	155261	.	+	.	ID=Dca57847.1;Parent=Dca57847
scaffold84	Augus-PASA	exon	151002	151172	.	+	.	ID=Dca57847.1.exon1;Parent=Dca57847.1
scaffold84	Augus-PASA	exon	151569	151678	.	+	.	ID=Dca57847.1.exon2;Parent=Dca57847.1
scaffold84	Augustus	exon	153325	153595	.	+	.	ID=Dca57847.1.exon3;Parent=Dca57847.1
scaffold84	Augustus	exon	153684	153783	.	+	.	ID=Dca57847.1.exon4;Parent=Dca57847.1
scaffold84	Augustus	exon	153973	154684	.	+	.	ID=Dca57847.1.exon5;Parent=Dca57847.1
scaffold84	Augus-PASA	exon	154867	154945	.	+	.	ID=Dca57847.1.exon6;Parent=Dca57847.1
scaffold84	Augus-PASA	exon	155046	155261	.	+	.	ID=Dca57847.1.exon7;Parent=Dca57847.1