Carnation DB

Dca57879.1

Annotation

5-exons
f-1
sp|F6H2T5_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#OrderedLocusNames=VIT_04s0008g02100#unknown#0F0P0C
sp|B9RQZ0_RICCO#Pentatricopeptide repeat-containing protein, putative#Ricinus communis (Castor bean)#ORFNames=RCOM_0707840#unknown#0F0P0C
Repeat List (scaffold84)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca57879.1	15	510	510	60	496	55	7e-155
Target_name	Start	End	Length	Cov(%)
sp\|F6H2T5_VITVI	20	575	575	96.69

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca57879.1	1	510	510	57.25	510	51	1e-145
Target_name	Start	End	Length	Cov(%)
AT2G26280.1	1	567	567	100

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold84	Augustus	mRNA	499858	504583	.	-	.	ID=Dca57879.1;Parent=Dca57879
scaffold84	Augustus	exon	499858	500161	.	-	.	ID=Dca57879.1.exon1;Parent=Dca57879.1
scaffold84	Augustus	exon	501056	501180	.	-	.	ID=Dca57879.1.exon2;Parent=Dca57879.1
scaffold84	Augustus	exon	503133	503203	.	-	.	ID=Dca57879.1.exon3;Parent=Dca57879.1
scaffold84	Augustus	exon	503289	503727	.	-	.	ID=Dca57879.1.exon4;Parent=Dca57879.1
scaffold84	Augustus	exon	503990	504583	.	-	.	ID=Dca57879.1.exon5;Parent=Dca57879.1