Dca57888.1
Annotation
- 4-exons
- f-2
- sp|D7SUI3_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#OrderedLocusNames=VIT_04s0008g04280#GO:0008270#1F0P0C
- sp|B9RS95_RICCO#Ring finger protein, putative#Ricinus communis (Castor bean)#ORFNames=RCOM_0804480#GO:0008270#1F0P0C
- Repeat List (scaffold84)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca57888.1 |
37 |
348 |
355 |
64.22 |
312 |
72 |
3e-134
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|D7SUI3_VITVI |
81 |
396 |
401 |
78.8 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca57888.1 |
39 |
340 |
355 |
57.74 |
302 |
67 |
6e-123
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| AT4G32600.1 |
107 |
408 |
453 |
66.66 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold84 |
Augus-PASA |
mRNA |
543311 |
545871 |
. |
- |
. |
ID=Dca57888.1;Parent=Dca57888 |
| scaffold84 |
Augus-PASA |
exon |
543311 |
543499 |
. |
- |
. |
ID=Dca57888.1.exon1;Parent=Dca57888.1 |
| scaffold84 |
Augus-PASA |
exon |
544118 |
544394 |
. |
- |
. |
ID=Dca57888.1.exon2;Parent=Dca57888.1 |
| scaffold84 |
Augus-PASA |
exon |
544487 |
544612 |
. |
- |
. |
ID=Dca57888.1.exon3;Parent=Dca57888.1 |
| scaffold84 |
Augustus |
exon |
545395 |
545871 |
. |
- |
. |
ID=Dca57888.1.exon4;Parent=Dca57888.1 |
