Carnation DB

Dca57899.1

Annotation

7-exons
f-1
sp|B9MTC4_POPTR#Predicted protein#Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp trichocarpa)#ORFNames=POPTRDRAFT_809842#unknown#0F0P0C
AT3G53450.1 | Symbols: | Putative lysine decarboxylase family protein | chr3:19812977-19815430 REVERSE LENGTH=215
Repeat List (scaffold840)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca57899.1	11	219	219	85.38	209	90	7e-107
Target_name	Start	End	Length	Cov(%)
sp\|B9MTC4_POPTR	3	211	211	99.05

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca57899.1	1	209	219	80.82	209	85	9e-105
Target_name	Start	End	Length	Cov(%)
AT3G53450.1	1	209	215	97.2

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold840	Augustus	mRNA	58838	64552	.	-	.	ID=Dca57899.1;Parent=Dca57899
scaffold840	Augustus	exon	58838	58930	.	-	.	ID=Dca57899.1.exon1;Parent=Dca57899.1
scaffold840	Augustus	exon	59050	59193	.	-	.	ID=Dca57899.1.exon2;Parent=Dca57899.1
scaffold840	Augustus	exon	59302	59372	.	-	.	ID=Dca57899.1.exon3;Parent=Dca57899.1
scaffold840	Augustus	exon	61944	62043	.	-	.	ID=Dca57899.1.exon4;Parent=Dca57899.1
scaffold840	Augustus	exon	63440	63470	.	-	.	ID=Dca57899.1.exon5;Parent=Dca57899.1
scaffold840	Augustus	exon	63984	64081	.	-	.	ID=Dca57899.1.exon6;Parent=Dca57899.1
scaffold840	Augustus	exon	64430	64552	.	-	.	ID=Dca57899.1.exon7;Parent=Dca57899.1