Carnation DB

Dca57922.1

Annotation

5-exons
f-2
sp|F6HZ37_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#OrderedLocusNames=VIT_07s0005g00250#unknown#0F0P0C
Os08t0359500-01 CS domain domain containing protein.
Repeat List (scaffold841)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca57922.1	1	155	232	44.39	155	67	1e-51
Target_name	Start	End	Length	Cov(%)
sp\|F6HZ37_VITVI	38	189	224	67.85

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca57922.1	1	127	232	36.2	127	66	3e-44
Target_name	Start	End	Length	Cov(%)
Os08t0359500-01	3	128	214	58.87

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold841	Augus-PASA	mRNA	41221	43992	.	-	.	ID=Dca57922.1;Parent=Dca57922
scaffold841	Augus-PASA	exon	41221	41318	.	-	.	ID=Dca57922.1.exon1;Parent=Dca57922.1
scaffold841	Augus-PASA	exon	42669	42894	.	-	.	ID=Dca57922.1.exon2;Parent=Dca57922.1
scaffold841	Augus-PASA	exon	42973	43010	.	-	.	ID=Dca57922.1.exon3;Parent=Dca57922.1
scaffold841	Augus-PASA	exon	43316	43466	.	-	.	ID=Dca57922.1.exon4;Parent=Dca57922.1
scaffold841	Augustus	exon	43806	43992	.	-	.	ID=Dca57922.1.exon5;Parent=Dca57922.1