Dca57940.1
Annotation
- 2-exons
- f-1
- sp|F6HU59_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#OrderedLocusNames=VIT_02s0025g02270#unknown#0F0P0C
- AT4G10800.1 | Symbols: | BEST Arabidopsis thaliana protein match is: BTB/POZ domain-containing protein (TAIR:AT3G05675.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). | chr4:6643678-6644529 FORWARD LENGTH=283
- Repeat List (scaffold842)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca57940.1 |
8 |
253 |
377 |
29.7 |
246 |
44 |
4e-55
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|F6HU59_VITVI |
157 |
411 |
431 |
59.16 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca57940.1 |
9 |
253 |
377 |
26.79 |
245 |
40 |
3e-51
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| AT4G10800.1 |
11 |
263 |
283 |
89.39 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold842 |
Augustus |
mRNA |
26244 |
27823 |
. |
+ |
. |
ID=Dca57940.1;Parent=Dca57940 |
| scaffold842 |
Augustus |
exon |
26244 |
27001 |
. |
+ |
. |
ID=Dca57940.1.exon1;Parent=Dca57940.1 |
| scaffold842 |
Augustus |
exon |
27448 |
27823 |
. |
+ |
. |
ID=Dca57940.1.exon2;Parent=Dca57940.1 |
