Dca5804.1
Annotation
- 3-exons
- f-1
- sp|E2DN01_BETVU#Putative uncharacterized protein#Beta vulgaris (Sugar beet)#unknown#GO:0003723;GO:0003964;GO:0008270;GO:0015074;GO:0006278#3F2P0C
- sp|G0Y6U4_ARAHY#Retrotransposon gag protein#Arachis hypogaea (Peanut)#ORFNames=303L13_14#unknown#0F0P0C
- Repeat List (scaffold12239)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca5804.1 |
1 |
133 |
219 |
48.4 |
133 |
80 |
3e-56
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|E2DN01_BETVU |
508 |
640 |
1717 |
7.74 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca5804.1 |
3 |
88 |
219 |
14.15 |
86 |
37 |
2e-10
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| Os12t0292200-01 |
106 |
190 |
192 |
44.27 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold12239 |
Augustus |
mRNA |
4938 |
6610 |
. |
+ |
. |
ID=Dca5804.1;Parent=Dca5804 |
| scaffold12239 |
Augustus |
exon |
4938 |
5421 |
. |
+ |
. |
ID=Dca5804.1.exon1;Parent=Dca5804.1 |
| scaffold12239 |
Augustus |
exon |
6356 |
6405 |
. |
+ |
. |
ID=Dca5804.1.exon2;Parent=Dca5804.1 |
| scaffold12239 |
Augustus |
exon |
6485 |
6610 |
. |
+ |
. |
ID=Dca5804.1.exon3;Parent=Dca5804.1 |
