Carnation DB

Dca5808.1

Annotation

5-exons
f-1
sp|B9HIY7_POPTR#NAC domain protein, IPR003441#Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp trichocarpa)#Name=NAC155#GO:0003677;GO:0006355#1F1P0C
Repeat List (scaffold1224)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca5808.1	23	401	403	55.08	379	58	4e-125
Target_name	Start	End	Length	Cov(%)
sp\|B9HIY7_POPTR	5	390	428	90.18

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca5808.1	23	403	403	51.11	381	50	7e-105
Target_name	Start	End	Length	Cov(%)
AT1G25580.1	6	414	449	91.09

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold1224	Augustus	mRNA	56365	58585	.	-	.	ID=Dca5808.1;Parent=Dca5808
scaffold1224	Augustus	exon	56365	56697	.	-	.	ID=Dca5808.1.exon1;Parent=Dca5808.1
scaffold1224	Augustus	exon	57340	57830	.	-	.	ID=Dca5808.1.exon2;Parent=Dca5808.1
scaffold1224	Augustus	exon	57921	58107	.	-	.	ID=Dca5808.1.exon3;Parent=Dca5808.1
scaffold1224	Augustus	exon	58263	58404	.	-	.	ID=Dca5808.1.exon4;Parent=Dca5808.1
scaffold1224	Augustus	exon	58527	58585	.	-	.	ID=Dca5808.1.exon5;Parent=Dca5808.1