Carnation DB

Dca58100.1

Annotation

8-exons
f-1
sp|F6HHK5_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#OrderedLocusNames=VIT_12s0057g00400#GO:0005524;GO:0004829;GO:0006435#2F1P0C
Os02t0538000-01 Similar to Threonyl-tRNA synthetase.
Repeat List (scaffold8478)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca58100.1	7	680	680	77.5	674	77	0
Target_name	Start	End	Length	Cov(%)
sp\|F6HHK5_VITVI	1	681	681	100

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca58100.1	42	680	680	74.41	639	80	0
Target_name	Start	End	Length	Cov(%)
AT2G04842.1	30	650	650	95.53

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold8478	Augustus	mRNA	14493	21942	.	-	.	ID=Dca58100.1;Parent=Dca58100
scaffold8478	Augustus	exon	14493	14753	.	-	.	ID=Dca58100.1.exon1;Parent=Dca58100.1
scaffold8478	Augustus	exon	15575	15775	.	-	.	ID=Dca58100.1.exon2;Parent=Dca58100.1
scaffold8478	Augustus	exon	15870	16178	.	-	.	ID=Dca58100.1.exon3;Parent=Dca58100.1
scaffold8478	Augustus	exon	16468	16845	.	-	.	ID=Dca58100.1.exon4;Parent=Dca58100.1
scaffold8478	Augustus	exon	19250	19503	.	-	.	ID=Dca58100.1.exon5;Parent=Dca58100.1
scaffold8478	Augustus	exon	20021	20168	.	-	.	ID=Dca58100.1.exon6;Parent=Dca58100.1
scaffold8478	Augustus	exon	20319	20465	.	-	.	ID=Dca58100.1.exon7;Parent=Dca58100.1
scaffold8478	Augustus	exon	21598	21942	.	-	.	ID=Dca58100.1.exon8;Parent=Dca58100.1