Dca58121.1
Annotation
- 4-exons
- f-1
- sp|O81506_ARATH#Putative retrotransposon protein#Arabidopsis thaliana (Mouse-ear cress)#Name=T7M24.7#GO:0003676;GO:0015074#1F1P0C
- Repeat List (scaffold8481)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca58121.1 |
123 |
468 |
473 |
44.39 |
346 |
56 |
8e-117
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|O81506_ARATH |
52 |
424 |
964 |
38.69 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca58121.1 |
148 |
428 |
473 |
22.41 |
281 |
34 |
2e-47
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| Os08t0125300-01 |
484 |
801 |
1428 |
22.26 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold8481 |
Augustus |
mRNA |
9012 |
10816 |
. |
- |
. |
ID=Dca58121.1;Parent=Dca58121 |
| scaffold8481 |
Augustus |
exon |
9012 |
9424 |
. |
- |
. |
ID=Dca58121.1.exon1;Parent=Dca58121.1 |
| scaffold8481 |
Augustus |
exon |
9503 |
10081 |
. |
- |
. |
ID=Dca58121.1.exon2;Parent=Dca58121.1 |
| scaffold8481 |
Augustus |
exon |
10288 |
10399 |
. |
- |
. |
ID=Dca58121.1.exon3;Parent=Dca58121.1 |
| scaffold8481 |
Augustus |
exon |
10499 |
10816 |
. |
- |
. |
ID=Dca58121.1.exon4;Parent=Dca58121.1 |
