Dca58129.1
Annotation
- 3-exons
- f-1
- sp|A5BE46_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#ORFNames=VITISV_025855#GO:0003676;GO:0008270;GO:0015074#2F1P0C
- Os08t0125300-01 Integrase, catalytic core domain containing protein.
- Repeat List (scaffold8485)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca58129.1 |
1 |
168 |
570 |
21.92 |
168 |
74 |
7e-65
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|A5BE46_VITVI |
74 |
241 |
1356 |
12.38 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca58129.1 |
416 |
570 |
570 |
11.22 |
155 |
42 |
4e-33
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| Os08t0125300-01 |
902 |
1053 |
1428 |
10.64 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold8485 |
Augustus |
mRNA |
3842 |
6670 |
. |
+ |
. |
ID=Dca58129.1;Parent=Dca58129 |
| scaffold8485 |
Augustus |
exon |
3842 |
4346 |
. |
+ |
. |
ID=Dca58129.1.exon1;Parent=Dca58129.1 |
| scaffold8485 |
Augustus |
exon |
5183 |
5700 |
. |
+ |
. |
ID=Dca58129.1.exon2;Parent=Dca58129.1 |
| scaffold8485 |
Augustus |
exon |
5981 |
6670 |
. |
+ |
. |
ID=Dca58129.1.exon3;Parent=Dca58129.1 |
