Dca58135.1
Annotation
- 2-exons
- f-1
- sp|A2I5E5_BETVU#Retrotransposon protein#Beta vulgaris (Sugar beet)#unknown#GO:0003723;GO:0003964;GO:0008270;GO:0015074;GO:0006278#3F2P0C
- Repeat List (scaffold8487)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca58135.1 |
4 |
944 |
975 |
53.84 |
941 |
54 |
0
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|A2I5E5_BETVU |
149 |
1112 |
1501 |
64.22 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca58135.1 |
195 |
935 |
975 |
26.76 |
741 |
36 |
1e-122
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| Os04t0191000-01 |
413 |
1097 |
1539 |
44.5 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold8487 |
Augustus |
mRNA |
1 |
3143 |
. |
+ |
. |
ID=Dca58135.1;Parent=Dca58135 |
| scaffold8487 |
Augustus |
exon |
1 |
2819 |
. |
+ |
. |
ID=Dca58135.1.exon1;Parent=Dca58135.1 |
| scaffold8487 |
Augustus |
exon |
3035 |
3143 |
. |
+ |
. |
ID=Dca58135.1.exon2;Parent=Dca58135.1 |
