Carnation DB

Dca58159.1

Annotation

5-exons
f-1
sp|B9S778_RICCO#Armadillo repeat-containing protein, putative#Ricinus communis (Castor bean)#ORFNames=RCOM_0774230#GO:0008270#1F0P0C
Repeat List (scaffold8493)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca58159.1	14	190	201	44.77	177	50	5e-48
Target_name	Start	End	Length	Cov(%)
sp\|B9S778_RICCO	60	238	719	24.89

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca58159.1	7	196	201	45.27	190	47	2e-45
Target_name	Start	End	Length	Cov(%)
AT4G33940.1	59	250	262	73.28

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold8493	Augus-PASA	mRNA	21179	26483	.	-	.	ID=Dca58159.1;Parent=Dca58159
scaffold8493	Augus-PASA	exon	21179	21312	.	-	.	ID=Dca58159.1.exon1;Parent=Dca58159.1
scaffold8493	Augus-PASA	exon	22322	22373	.	-	.	ID=Dca58159.1.exon2;Parent=Dca58159.1
scaffold8493	Augus-PASA	exon	24212	24310	.	-	.	ID=Dca58159.1.exon3;Parent=Dca58159.1
scaffold8493	Augus-PASA	exon	25846	26042	.	-	.	ID=Dca58159.1.exon4;Parent=Dca58159.1
scaffold8493	Augus-PASA	exon	26360	26483	.	-	.	ID=Dca58159.1.exon5;Parent=Dca58159.1