Carnation DB

Dca58172.1

Annotation

5-exons
f-1
sp|Q1A230_PRUDO#Polygalacturonase#Prunus domestica subsp insititia#unknown#GO:0005576;GO:0004650;GO:0005975;GO:0007047#1F2P1C
Repeat List (scaffold85)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca58172.1	23	278	308	45.45	256	55	2e-78
Target_name	Start	End	Length	Cov(%)
sp\|Q1A230_PRUDO	114	368	393	64.88

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca58172.1	23	284	308	44.8	262	53	2e-76
Target_name	Start	End	Length	Cov(%)
AT3G59850.1	110	371	388	67.52

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold85	Augustus	mRNA	12845	19860	.	+	.	ID=Dca58172.1;Parent=Dca58172
scaffold85	Augustus	exon	12845	12909	.	+	.	ID=Dca58172.1.exon1;Parent=Dca58172.1
scaffold85	Augustus	exon	17922	18027	.	+	.	ID=Dca58172.1.exon2;Parent=Dca58172.1
scaffold85	Augustus	exon	18632	18921	.	+	.	ID=Dca58172.1.exon3;Parent=Dca58172.1
scaffold85	Augustus	exon	19043	19274	.	+	.	ID=Dca58172.1.exon4;Parent=Dca58172.1
scaffold85	Augustus	exon	19627	19860	.	+	.	ID=Dca58172.1.exon5;Parent=Dca58172.1