Carnation DB

Dca58175.1

Annotation

5-exons
f-1
sp|A5AW36_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#ORFNames=VITISV_028820#unknown#0F0P0C
sp|Q2HW11_MEDTR#Pentatricopeptide repeat-containing protein#Medicago truncatula (Barrel medic) (Medicago tribuloides)#ORFNames=MTR_7g079860, MtrDRAFT_AC148289g16v2#GO:0005488#1F0P0C
Repeat List (scaffold85)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca58175.1	65	792	831	41.75	728	43	7e-171
Target_name	Start	End	Length	Cov(%)
sp\|A5AW36_VITVI	66	865	871	91.84

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca58175.1	13	570	831	29.84	558	44	3e-140
Target_name	Start	End	Length	Cov(%)
Os07t0239600-01	23	580	721	77.39

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold85	Augustus	mRNA	35245	40370	.	+	.	ID=Dca58175.1;Parent=Dca58175
scaffold85	Augustus	exon	35245	36957	.	+	.	ID=Dca58175.1.exon1;Parent=Dca58175.1
scaffold85	Augustus	exon	37115	37266	.	+	.	ID=Dca58175.1.exon2;Parent=Dca58175.1
scaffold85	Augustus	exon	38834	39030	.	+	.	ID=Dca58175.1.exon3;Parent=Dca58175.1
scaffold85	Augustus	exon	39134	39280	.	+	.	ID=Dca58175.1.exon4;Parent=Dca58175.1
scaffold85	Augustus	exon	40084	40370	.	+	.	ID=Dca58175.1.exon5;Parent=Dca58175.1