Carnation DB

Dca58177.1

Annotation

7-exons
f-2
sp|B3TM17_ELAGV#Translation initiation factor#Elaeis guineensis var tenera (Oil palm)#unknown#GO:0003743;GO:0016070#1F1P0C
Repeat List (scaffold85)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca58177.1	1	409	409	87.04	409	88	0
Target_name	Start	End	Length	Cov(%)
sp\|B3TM17_ELAGV	3	411	411	99.51

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca58177.1	1	402	409	79.21	402	81	0
Target_name	Start	End	Length	Cov(%)
AT5G36230.1	3	404	411	97.81

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold85	Augustus	mRNA	47000	50096	.	+	.	ID=Dca58177.1;Parent=Dca58177
scaffold85	Augustus	exon	47000	47023	.	+	.	ID=Dca58177.1.exon1;Parent=Dca58177.1
scaffold85	Augus-PASA	exon	47784	47889	.	+	.	ID=Dca58177.1.exon2;Parent=Dca58177.1
scaffold85	Augus-PASA	exon	48003	48071	.	+	.	ID=Dca58177.1.exon3;Parent=Dca58177.1
scaffold85	Augus-PASA	exon	48709	49202	.	+	.	ID=Dca58177.1.exon4;Parent=Dca58177.1
scaffold85	Augus-PASA	exon	49304	49565	.	+	.	ID=Dca58177.1.exon5;Parent=Dca58177.1
scaffold85	Augus-PASA	exon	49694	49902	.	+	.	ID=Dca58177.1.exon6;Parent=Dca58177.1
scaffold85	Augus-PASA	exon	50030	50096	.	+	.	ID=Dca58177.1.exon7;Parent=Dca58177.1