Carnation DB

Dca58181.1

Annotation

8-exons
f-1
sp|A9P7Z6_POPTR#Predicted protein#Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp trichocarpa)#ORFNames=POPTRDRAFT_814508#unknown#0F0P0C
Repeat List (scaffold85)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca58181.1	5	300	300	64	296	65	2e-99
Target_name	Start	End	Length	Cov(%)
sp\|A9P7Z6_POPTR	7	291	291	97.93

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca58181.1	23	289	300	58	267	65	8e-96
Target_name	Start	End	Length	Cov(%)
AT1G65270.2	20	288	292	92.12

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold85	Augus-PASA	mRNA	70160	73533	.	+	.	ID=Dca58181.1;Parent=Dca58181
scaffold85	Augus-PASA	exon	70160	70477	.	+	.	ID=Dca58181.1.exon1;Parent=Dca58181.1
scaffold85	Augus-PASA	exon	71402	71464	.	+	.	ID=Dca58181.1.exon2;Parent=Dca58181.1
scaffold85	Augus-PASA	exon	71570	71665	.	+	.	ID=Dca58181.1.exon3;Parent=Dca58181.1
scaffold85	Augus-PASA	exon	72032	72082	.	+	.	ID=Dca58181.1.exon4;Parent=Dca58181.1
scaffold85	Augus-PASA	exon	72681	72752	.	+	.	ID=Dca58181.1.exon5;Parent=Dca58181.1
scaffold85	Augus-PASA	exon	72918	72976	.	+	.	ID=Dca58181.1.exon6;Parent=Dca58181.1
scaffold85	Augus-PASA	exon	73197	73290	.	+	.	ID=Dca58181.1.exon7;Parent=Dca58181.1
scaffold85	Augustus	exon	73384	73533	.	+	.	ID=Dca58181.1.exon8;Parent=Dca58181.1