Dca5825.1
Annotation
- 3-exons
- f-1
- sp|Q8S7P4_ORYSJ#Putative transposase#Oryza sativa subsp japonica (Rice)#Name=OSJNBa0095C07.21#GO:0003676;GO:0046983#2F0P0C
- Repeat List (scaffold1225)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca5825.1 |
32 |
426 |
542 |
44.64 |
395 |
61 |
1e-143
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|Q8S7P4_ORYSJ |
228 |
623 |
811 |
48.82 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca5825.1 |
32 |
418 |
542 |
35.05 |
387 |
49 |
8e-109
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| AT1G19260.1 |
189 |
575 |
769 |
50.32 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold1225 |
Augustus |
mRNA |
18096 |
22111 |
. |
+ |
. |
ID=Dca5825.1;Parent=Dca5825 |
| scaffold1225 |
Augustus |
exon |
18096 |
18186 |
. |
+ |
. |
ID=Dca5825.1.exon1;Parent=Dca5825.1 |
| scaffold1225 |
Augustus |
exon |
18318 |
19492 |
. |
+ |
. |
ID=Dca5825.1.exon2;Parent=Dca5825.1 |
| scaffold1225 |
Augustus |
exon |
21749 |
22111 |
. |
+ |
. |
ID=Dca5825.1.exon3;Parent=Dca5825.1 |
