Dca58254.1
Annotation
- 4-exons
- f-1
- sp|E2DN01_BETVU#Putative uncharacterized protein#Beta vulgaris (Sugar beet)#unknown#GO:0003723;GO:0003964;GO:0008270;GO:0015074;GO:0006278#3F2P0C
- sp|Q9FZN9_ARATH#Retroelement pol polyprotein-like#Arabidopsis thaliana (Mouse-ear cress)#unknown#GO:0003723;GO:0003964;GO:0015074;GO:0006278#2F2P0C
- Repeat List (scaffold8514)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca58254.1 |
1 |
46 |
88 |
28.4 |
46 |
55 |
2e-10
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|Q75H60_ORYSJ |
340 |
385 |
743 |
6.19 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca58254.1 |
55 |
114 |
785 |
4.07 |
60 |
53 |
6e-11
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| ATMG00750.1 |
35 |
95 |
119 |
51.26 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold8514 |
Augustus |
mRNA |
1251 |
5709 |
. |
+ |
. |
ID=Dca58254.1;Parent=Dca58254 |
| scaffold8514 |
Augustus |
exon |
1251 |
1533 |
. |
+ |
. |
ID=Dca58254.1.exon1;Parent=Dca58254.1 |
| scaffold8514 |
Augustus |
exon |
1657 |
2310 |
. |
+ |
. |
ID=Dca58254.1.exon2;Parent=Dca58254.1 |
| scaffold8514 |
Augustus |
exon |
4037 |
4528 |
. |
+ |
. |
ID=Dca58254.1.exon3;Parent=Dca58254.1 |
| scaffold8514 |
Augustus |
exon |
4781 |
5709 |
. |
+ |
. |
ID=Dca58254.1.exon4;Parent=Dca58254.1 |
