Carnation DB

Dca58489.1

Annotation

5-exons
f-1
sp|B9RUW0_RICCO#Auxin-responsive protein IAA1, putative#Ricinus communis (Castor bean)#ORFNames=RCOM_0895150#GO:0005634;GO:0046983;GO:0009734;GO:0006355;GO:0006351#1F3P1C
Repeat List (scaffold8596)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca58489.1	7	197	203	61.57	191	65	4e-66
Target_name	Start	End	Length	Cov(%)
sp\|B9RUW0_RICCO	12	203	217	88.47

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca58489.1	12	197	203	52.21	186	50	1e-49
Target_name	Start	End	Length	Cov(%)
AT4G14550.1	1	215	228	94.29

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold8596	Augus-PASA	mRNA	7356	9407	.	-	.	ID=Dca58489.1;Parent=Dca58489
scaffold8596	Augus-PASA	exon	7356	7368	.	-	.	ID=Dca58489.1.exon1;Parent=Dca58489.1
scaffold8596	Augus-PASA	exon	7781	7846	.	-	.	ID=Dca58489.1.exon2;Parent=Dca58489.1
scaffold8596	Augus-PASA	exon	7958	8069	.	-	.	ID=Dca58489.1.exon3;Parent=Dca58489.1
scaffold8596	Augus-PASA	exon	8873	9054	.	-	.	ID=Dca58489.1.exon4;Parent=Dca58489.1
scaffold8596	Augus-PASA	exon	9169	9407	.	-	.	ID=Dca58489.1.exon5;Parent=Dca58489.1