Carnation DB

Dca58552.1

Annotation

9-exons
f-1
sp|D7T397_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#OrderedLocusNames=VIT_13s0064g00010#unknown#0F0P0C
AT3G52030.1 | Symbols: | F-box family protein with WD40/YVTN repeat doamin | chr3:19301872-19304227 FORWARD LENGTH=454
Repeat List (scaffold86)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca58552.1	4	422	425	59.05	419	59	1e-138
Target_name	Start	End	Length	Cov(%)
sp\|D7T397_VITVI	8	434	435	98.16

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca58552.1	2	415	425	52.47	414	50	1e-121
Target_name	Start	End	Length	Cov(%)
AT3G52030.1	9	452	454	97.79

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold86	Augus-PASA	mRNA	456912	460146	.	-	.	ID=Dca58552.1;Parent=Dca58552
scaffold86	Augus-PASA	exon	456912	457305	.	-	.	ID=Dca58552.1.exon1;Parent=Dca58552.1
scaffold86	Augus-PASA	exon	457403	457487	.	-	.	ID=Dca58552.1.exon2;Parent=Dca58552.1
scaffold86	Augus-PASA	exon	457658	457800	.	-	.	ID=Dca58552.1.exon3;Parent=Dca58552.1
scaffold86	Augus-PASA	exon	458329	458418	.	-	.	ID=Dca58552.1.exon4;Parent=Dca58552.1
scaffold86	Augus-PASA	exon	458776	458879	.	-	.	ID=Dca58552.1.exon5;Parent=Dca58552.1
scaffold86	Augus-PASA	exon	459362	459460	.	-	.	ID=Dca58552.1.exon6;Parent=Dca58552.1
scaffold86	Augus-PASA	exon	459589	459643	.	-	.	ID=Dca58552.1.exon7;Parent=Dca58552.1
scaffold86	Augustus	exon	459726	459908	.	-	.	ID=Dca58552.1.exon8;Parent=Dca58552.1
scaffold86	Augustus	exon	460022	460146	.	-	.	ID=Dca58552.1.exon9;Parent=Dca58552.1