Carnation DB

Dca58571.1

Annotation

6-exons
f-1
sp|B9HDU7_POPTR#Predicted protein#Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp trichocarpa)#ORFNames=POPTRDRAFT_418161#GO:0016020#0F0P1C
Os05t0409500-00 Similar to MtN21 protein.
Repeat List (scaffold860)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca58571.1	1	332	343	73.76	332	72	6e-143
Target_name	Start	End	Length	Cov(%)
sp\|B9HDU7_POPTR	22	373	375	93.86

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca58571.1	1	326	343	67.93	326	67	4e-129
Target_name	Start	End	Length	Cov(%)
Os05t0409500-00	106	451	488	70.9

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold860	Augustus	mRNA	29112	31794	.	+	.	ID=Dca58571.1;Parent=Dca58571
scaffold860	Augustus	exon	29112	29227	.	+	.	ID=Dca58571.1.exon1;Parent=Dca58571.1
scaffold860	Augustus	exon	29502	29618	.	+	.	ID=Dca58571.1.exon2;Parent=Dca58571.1
scaffold860	Augustus	exon	29871	30123	.	+	.	ID=Dca58571.1.exon3;Parent=Dca58571.1
scaffold860	Augustus	exon	30588	30746	.	+	.	ID=Dca58571.1.exon4;Parent=Dca58571.1
scaffold860	Augustus	exon	30877	31028	.	+	.	ID=Dca58571.1.exon5;Parent=Dca58571.1
scaffold860	Augustus	exon	31560	31794	.	+	.	ID=Dca58571.1.exon6;Parent=Dca58571.1