Carnation DB

Dca58580.1

Annotation

7-exons
f-1
sp|B9HDU1_POPTR#Predicted protein#Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp trichocarpa)#ORFNames=POPTRDRAFT_818987#GO:0016021#0F0P1C
AT5G19750.1 | Symbols: | Peroxisomal membrane 22 kDa (Mpv17/PMP22) family protein | chr5:6677124-6679127 FORWARD LENGTH=288
Repeat List (scaffold860)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca58580.1	42	221	221	67.42	180	83	2e-83
Target_name	Start	End	Length	Cov(%)
sp\|B9HDU1_POPTR	107	286	286	62.93

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca58580.1	46	221	221	59.27	176	75	2e-72
Target_name	Start	End	Length	Cov(%)
AT5G19750.1	113	288	288	61.11

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold860	Augustus	mRNA	108021	110855	.	-	.	ID=Dca58580.1;Parent=Dca58580
scaffold860	Augustus	exon	108021	108101	.	-	.	ID=Dca58580.1.exon1;Parent=Dca58580.1
scaffold860	Augustus	exon	108346	108432	.	-	.	ID=Dca58580.1.exon2;Parent=Dca58580.1
scaffold860	Augustus	exon	108527	108619	.	-	.	ID=Dca58580.1.exon3;Parent=Dca58580.1
scaffold860	Augustus	exon	108744	108816	.	-	.	ID=Dca58580.1.exon4;Parent=Dca58580.1
scaffold860	Augustus	exon	108970	109064	.	-	.	ID=Dca58580.1.exon5;Parent=Dca58580.1
scaffold860	Augustus	exon	109225	109312	.	-	.	ID=Dca58580.1.exon6;Parent=Dca58580.1
scaffold860	Augustus	exon	110707	110855	.	-	.	ID=Dca58580.1.exon7;Parent=Dca58580.1