Dca5874.1
Annotation
- 3-exons
- f-1
- sp|D3IVU0_9POAL#Putative retrotransposon protein#Phyllostachys edulis#unknown#GO:0003676;GO:0008270;GO:0015074#2F1P0C
- Repeat List (scaffold12278)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca5874.1 |
92 |
359 |
365 |
46.57 |
268 |
63 |
1e-97
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|D3IVU0_9POAL |
623 |
893 |
896 |
30.24 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca5874.1 |
92 |
344 |
365 |
23.83 |
253 |
34 |
3e-32
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| Os11t0656500-01 |
1132 |
1378 |
1401 |
17.63 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold12278 |
Augustus |
mRNA |
4809 |
6642 |
. |
- |
. |
ID=Dca5874.1;Parent=Dca5874 |
| scaffold12278 |
Augustus |
exon |
4809 |
5278 |
. |
- |
. |
ID=Dca5874.1.exon1;Parent=Dca5874.1 |
| scaffold12278 |
Augustus |
exon |
5393 |
5742 |
. |
- |
. |
ID=Dca5874.1.exon2;Parent=Dca5874.1 |
| scaffold12278 |
Augustus |
exon |
6365 |
6642 |
. |
- |
. |
ID=Dca5874.1.exon3;Parent=Dca5874.1 |
