Carnation DB

Dca5881.1

Annotation

7-exons
f-1
sp|E5L4Y4_VITVI#Germacrene A synthase#Vitis vinifera (Grape)#Name=GerA#GO:0000287;GO:0010333#2F0P0C
Repeat List (scaffold1228)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca5881.1	15	560	561	48.12	546	50	4e-160
Target_name	Start	End	Length	Cov(%)
sp\|E5L4Y4_VITVI	14	555	555	97.65

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca5881.1	16	561	561	39.39	546	40	3e-113
Target_name	Start	End	Length	Cov(%)
AT5G23960.1	3	547	547	99.63

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold1228	Augustus	mRNA	60197	64554	.	-	.	ID=Dca5881.1;Parent=Dca5881
scaffold1228	Augustus	exon	60197	60493	.	-	.	ID=Dca5881.1.exon1;Parent=Dca5881.1
scaffold1228	Augustus	exon	60594	60845	.	-	.	ID=Dca5881.1.exon2;Parent=Dca5881.1
scaffold1228	Augustus	exon	60980	61118	.	-	.	ID=Dca5881.1.exon3;Parent=Dca5881.1
scaffold1228	Augustus	exon	61243	61461	.	-	.	ID=Dca5881.1.exon4;Parent=Dca5881.1
scaffold1228	Augustus	exon	62062	62437	.	-	.	ID=Dca5881.1.exon5;Parent=Dca5881.1
scaffold1228	Augustus	exon	62637	62913	.	-	.	ID=Dca5881.1.exon6;Parent=Dca5881.1
scaffold1228	Augustus	exon	64429	64554	.	-	.	ID=Dca5881.1.exon7;Parent=Dca5881.1