Dca5882.1
Annotation
- 2-exons
- f-1
- sp|F4NCG3_BETVU#Putative uncharacterized protein#Beta vulgaris subsp vulgaris#unknown#GO:0003723;GO:0003964;GO:0006278#2F1P0C
- Os06t0484800-00 Reverse transcriptase domain containing protein.
- Repeat List (scaffold1228)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca5882.1 |
27 |
838 |
852 |
35.32 |
812 |
37 |
4e-154
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|F4NCG3_BETVU |
183 |
991 |
1114 |
72.62 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca5882.1 |
26 |
770 |
852 |
27.23 |
745 |
31 |
3e-90
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| Os06t0484800-00 |
106 |
841 |
857 |
85.88 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold1228 |
Augustus |
mRNA |
71309 |
73967 |
. |
- |
. |
ID=Dca5882.1;Parent=Dca5882 |
| scaffold1228 |
Augustus |
exon |
71309 |
71343 |
. |
- |
. |
ID=Dca5882.1.exon1;Parent=Dca5882.1 |
| scaffold1228 |
Augustus |
exon |
71444 |
73967 |
. |
- |
. |
ID=Dca5882.1.exon2;Parent=Dca5882.1 |
