Carnation DB

Dca58896.1

Annotation

8-exons
f-1
sp|D7T1F5_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#OrderedLocusNames=VIT_06s0009g01890#GO:0005622;GO:0004527;GO:0003676#2F0P1C
AT2G26970.1 | Symbols: | Polynucleotidyl transferase, ribonuclease H-like superfamily protein | chr2:11509908-11511903 REVERSE LENGTH=222
Repeat List (scaffold870)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca58896.1	10	225	231	68.83	216	74	2e-86
Target_name	Start	End	Length	Cov(%)
sp\|D7T1F5_VITVI	23	238	245	88.16

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca58896.1	9	225	231	64.93	217	70	3e-82
Target_name	Start	End	Length	Cov(%)
AT2G26970.1	19	218	222	90.09

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold870	Augus-PASA	mRNA	88718	94988	.	-	.	ID=Dca58896.1;Parent=Dca58896
scaffold870	Augus-PASA	exon	88718	88836	.	-	.	ID=Dca58896.1.exon1;Parent=Dca58896.1
scaffold870	Augus-PASA	exon	89014	89104	.	-	.	ID=Dca58896.1.exon2;Parent=Dca58896.1
scaffold870	Augus-PASA	exon	90300	90386	.	-	.	ID=Dca58896.1.exon3;Parent=Dca58896.1
scaffold870	Augus-PASA	exon	91333	91388	.	-	.	ID=Dca58896.1.exon4;Parent=Dca58896.1
scaffold870	Augus-PASA	exon	91663	91744	.	-	.	ID=Dca58896.1.exon5;Parent=Dca58896.1
scaffold870	Augus-PASA	exon	92241	92317	.	-	.	ID=Dca58896.1.exon6;Parent=Dca58896.1
scaffold870	Augus-PASA	exon	92840	92974	.	-	.	ID=Dca58896.1.exon7;Parent=Dca58896.1
scaffold870	Augus-PASA	exon	94940	94988	.	-	.	ID=Dca58896.1.exon8;Parent=Dca58896.1