Carnation DB

Dca5895.1

Annotation

7-exons
f-1
sp|D7TL46_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#OrderedLocusNames=VIT_08s0056g01290#GO:0005524;GO:0004672#2F0P0C
AT3G03770.1 | Symbols: | Leucine-rich repeat protein kinase family protein | chr3:945303-948436 REVERSE LENGTH=802
Repeat List (scaffold1229)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca5895.1	6	773	774	50.12	768	50	0
Target_name	Start	End	Length	Cov(%)
sp\|D7TL46_VITVI	3	776	786	98.47

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca5895.1	46	756	774	45.99	711	50	0
Target_name	Start	End	Length	Cov(%)
AT3G03770.1	43	756	802	89.02

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold1229	Augus-PASA	mRNA	10268	13425	.	-	.	ID=Dca5895.1;Parent=Dca5895
scaffold1229	Augus-PASA	exon	10268	10519	.	-	.	ID=Dca5895.1.exon1;Parent=Dca5895.1
scaffold1229	Augus-PASA	exon	10644	10755	.	-	.	ID=Dca5895.1.exon2;Parent=Dca5895.1
scaffold1229	Augus-PASA	exon	10963	11012	.	-	.	ID=Dca5895.1.exon3;Parent=Dca5895.1
scaffold1229	Augus-PASA	exon	11101	11294	.	-	.	ID=Dca5895.1.exon4;Parent=Dca5895.1
scaffold1229	Augus-PASA	exon	11425	11665	.	-	.	ID=Dca5895.1.exon5;Parent=Dca5895.1
scaffold1229	Augustus	exon	11843	11976	.	-	.	ID=Dca5895.1.exon6;Parent=Dca5895.1
scaffold1229	Augustus	exon	12084	13425	.	-	.	ID=Dca5895.1.exon7;Parent=Dca5895.1