Dca59055.1
Annotation
- 4-exons
- f-1
- sp|A5C6U7_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#ORFNames=VITISV_004899#GO:0005622;GO:0004523;GO:0003723;GO:0003964;GO:0015074;GO:0006278#3F2P1C
- Os08t0202300-03 Reverse transcriptase domain containing protein.
- Repeat List (scaffold8762)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca59055.1 |
580 |
781 |
795 |
16.47 |
202 |
65 |
4e-81
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|A5C6U7_VITVI |
495 |
696 |
2452 |
8.23 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca59055.1 |
612 |
781 |
795 |
7.67 |
170 |
36 |
1e-18
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| Os12t0142900-02 |
213 |
378 |
707 |
23.47 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold8762 |
Augustus |
mRNA |
1260 |
8778 |
. |
- |
. |
ID=Dca59055.1;Parent=Dca59055 |
| scaffold8762 |
Augustus |
exon |
1260 |
1303 |
. |
- |
. |
ID=Dca59055.1.exon1;Parent=Dca59055.1 |
| scaffold8762 |
Augustus |
exon |
5476 |
6085 |
. |
- |
. |
ID=Dca59055.1.exon2;Parent=Dca59055.1 |
| scaffold8762 |
Augustus |
exon |
6658 |
8205 |
. |
- |
. |
ID=Dca59055.1.exon3;Parent=Dca59055.1 |
| scaffold8762 |
Augustus |
exon |
8593 |
8778 |
. |
- |
. |
ID=Dca59055.1.exon4;Parent=Dca59055.1 |
