Carnation DB

Dca59159.1

Annotation

23-exons
f-1
sp|F6H077_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#OrderedLocusNames=VIT_18s0001g14020#GO:0005634;GO:0004534;GO:0003676;GO:0008270#3F0P1C
Os01t0872700-01 Zinc finger, CCHC-type domain containing protein.
Repeat List (scaffold88)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca59159.1	895	1100	1107	7.22	206	30	2e-10
Target_name	Start	End	Length	Cov(%)
sp\|F6H077_VITVI	792	1057	1065	24.97

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca59159.1	1	850	1107	58.17	850	76	0
Target_name	Start	End	Length	Cov(%)
Os01t0872700-01	1	844	1069	78.95

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold88	Augustus	mRNA	88794	99388	.	+	.	ID=Dca59159.1;Parent=Dca59159
scaffold88	Augustus	exon	88794	88997	.	+	.	ID=Dca59159.1.exon1;Parent=Dca59159.1
scaffold88	Augustus	exon	90657	90759	.	+	.	ID=Dca59159.1.exon2;Parent=Dca59159.1
scaffold88	Augustus	exon	90834	90910	.	+	.	ID=Dca59159.1.exon3;Parent=Dca59159.1
scaffold88	Augustus	exon	91004	91195	.	+	.	ID=Dca59159.1.exon4;Parent=Dca59159.1
scaffold88	Augustus	exon	91282	91401	.	+	.	ID=Dca59159.1.exon5;Parent=Dca59159.1
scaffold88	Augustus	exon	91501	91563	.	+	.	ID=Dca59159.1.exon6;Parent=Dca59159.1
scaffold88	Augustus	exon	91678	91824	.	+	.	ID=Dca59159.1.exon7;Parent=Dca59159.1
scaffold88	Augustus	exon	91913	92077	.	+	.	ID=Dca59159.1.exon8;Parent=Dca59159.1
scaffold88	Augustus	exon	92752	92829	.	+	.	ID=Dca59159.1.exon9;Parent=Dca59159.1
scaffold88	Augustus	exon	92943	93029	.	+	.	ID=Dca59159.1.exon10;Parent=Dca59159.1
scaffold88	Augustus	exon	93592	93873	.	+	.	ID=Dca59159.1.exon11;Parent=Dca59159.1
scaffold88	Augustus	exon	93982	94077	.	+	.	ID=Dca59159.1.exon12;Parent=Dca59159.1
scaffold88	Augustus	exon	94576	94671	.	+	.	ID=Dca59159.1.exon13;Parent=Dca59159.1
scaffold88	Augustus	exon	95668	95738	.	+	.	ID=Dca59159.1.exon14;Parent=Dca59159.1
scaffold88	Augustus	exon	96103	96231	.	+	.	ID=Dca59159.1.exon15;Parent=Dca59159.1
scaffold88	Augustus	exon	96306	96382	.	+	.	ID=Dca59159.1.exon16;Parent=Dca59159.1
scaffold88	Augustus	exon	96626	96666	.	+	.	ID=Dca59159.1.exon17;Parent=Dca59159.1
scaffold88	Augustus	exon	96754	96828	.	+	.	ID=Dca59159.1.exon18;Parent=Dca59159.1
scaffold88	Augustus	exon	96926	97083	.	+	.	ID=Dca59159.1.exon19;Parent=Dca59159.1
scaffold88	Augustus	exon	97382	97498	.	+	.	ID=Dca59159.1.exon20;Parent=Dca59159.1
scaffold88	Augustus	exon	97598	97673	.	+	.	ID=Dca59159.1.exon21;Parent=Dca59159.1
scaffold88	Augustus	exon	98073	98392	.	+	.	ID=Dca59159.1.exon22;Parent=Dca59159.1
scaffold88	Augustus	exon	98839	99388	.	+	.	ID=Dca59159.1.exon23;Parent=Dca59159.1