Dca59172.1
Annotation
- 4-exons
- f-1
- sp|B9GNL2_POPTR#Predicted protein#Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp trichocarpa)#ORFNames=POPTRDRAFT_816438#GO:0003677;GO:0006281#1F1P0C
- AT3G12210.2 | Symbols: | DNA binding | chr3:3894843-3895879 FORWARD LENGTH=209
- Repeat List (scaffold88)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca59172.1 |
8 |
219 |
221 |
61.99 |
212 |
65 |
5e-71
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|B9GNL2_POPTR |
7 |
218 |
218 |
97.24 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca59172.1 |
1 |
219 |
221 |
62.44 |
219 |
63 |
3e-62
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| AT3G12210.2 |
1 |
209 |
209 |
100 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold88 |
Augustus |
mRNA |
187912 |
191995 |
. |
+ |
. |
ID=Dca59172.1;Parent=Dca59172 |
| scaffold88 |
Augustus |
exon |
187912 |
188132 |
. |
+ |
. |
ID=Dca59172.1.exon1;Parent=Dca59172.1 |
| scaffold88 |
Augustus |
exon |
190249 |
190447 |
. |
+ |
. |
ID=Dca59172.1.exon2;Parent=Dca59172.1 |
| scaffold88 |
Augustus |
exon |
191161 |
191247 |
. |
+ |
. |
ID=Dca59172.1.exon3;Parent=Dca59172.1 |
| scaffold88 |
Augustus |
exon |
191837 |
191995 |
. |
+ |
. |
ID=Dca59172.1.exon4;Parent=Dca59172.1 |
