Carnation DB

Dca59184.1

Annotation

5-exons
f-1
sp|F6H1B8_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#OrderedLocusNames=VIT_18s0001g10260#GO:0008270#1F0P0C
AT5G42940.1 | Symbols: | RING/U-box superfamily protein | chr5:17216649-17219171 REVERSE LENGTH=691
Repeat List (scaffold88)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca59184.1	1	701	704	50.42	701	49	6e-161
Target_name	Start	End	Length	Cov(%)
sp\|F6H1B8_VITVI	1	732	734	99.72

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca59184.1	1	703	704	37.92	703	37	3e-87
Target_name	Start	End	Length	Cov(%)
AT5G42940.1	1	684	691	98.98

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold88	Augustus	mRNA	271005	275161	.	-	.	ID=Dca59184.1;Parent=Dca59184
scaffold88	Augustus	exon	271005	271139	.	-	.	ID=Dca59184.1.exon1;Parent=Dca59184.1
scaffold88	Augustus	exon	271355	271498	.	-	.	ID=Dca59184.1.exon2;Parent=Dca59184.1
scaffold88	Augustus	exon	271611	271709	.	-	.	ID=Dca59184.1.exon3;Parent=Dca59184.1
scaffold88	Augustus	exon	272018	272068	.	-	.	ID=Dca59184.1.exon4;Parent=Dca59184.1
scaffold88	Augustus	exon	273476	275161	.	-	.	ID=Dca59184.1.exon5;Parent=Dca59184.1