Carnation DB

Dca5919.1

Annotation

7-exons
f-1
sp|B9RAA1_RICCO#Putative uncharacterized protein#Ricinus communis (Castor bean)#ORFNames=RCOM_1504890#GO:0016021;GO:0005886;GO:0008643#0F1P2C
AT5G23660.1 | Symbols: MTN3, SWEET12, AtSWEET12 | homolog of Medicago truncatula MTN3 | chr5:7971936-7973796 REVERSE LENGTH=285
Repeat List (scaffold123)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca5919.1	5	294	428	36.44	290	54	4e-83
Target_name	Start	End	Length	Cov(%)
sp\|B9RAA1_RICCO	7	275	297	90.57

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca5919.1	5	267	428	34.11	263	54	1e-78
Target_name	Start	End	Length	Cov(%)
AT5G23660.1	7	281	285	96.49

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold123	Augus-PASA	mRNA	103291	109984	.	+	.	ID=Dca5919.1;Parent=Dca5919
scaffold123	Augus-PASA	exon	103291	103336	.	+	.	ID=Dca5919.1.exon1;Parent=Dca5919.1
scaffold123	Augus-PASA	exon	104077	104113	.	+	.	ID=Dca5919.1.exon2;Parent=Dca5919.1
scaffold123	Augus-PASA	exon	104591	104801	.	+	.	ID=Dca5919.1.exon3;Parent=Dca5919.1
scaffold123	Augus-PASA	exon	105193	105354	.	+	.	ID=Dca5919.1.exon4;Parent=Dca5919.1
scaffold123	Augus-PASA	exon	105589	105708	.	+	.	ID=Dca5919.1.exon5;Parent=Dca5919.1
scaffold123	Augustus	exon	108108	108423	.	+	.	ID=Dca5919.1.exon6;Parent=Dca5919.1
scaffold123	Augustus	exon	109590	109984	.	+	.	ID=Dca5919.1.exon7;Parent=Dca5919.1