Dca59192.1
Annotation
- 4-exons
- f-1
- sp|D7U865_VITVI#40S ribosomal protein S12#Vitis vinifera (Grape)#OrderedLocusNames=VIT_09s0070g00050#GO:0005840;GO:0003735;GO:0006412#1F1P1C
- Repeat List (scaffold880)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca59192.1 |
1 |
143 |
143 |
82.51 |
143 |
82 |
5e-62
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|D7U865_VITVI |
87 |
228 |
228 |
62.28 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca59192.1 |
14 |
143 |
143 |
78.32 |
130 |
85 |
2e-60
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| Os07t0229900-01 |
6 |
138 |
139 |
95.68 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold880 |
Augustus |
mRNA |
16438 |
17454 |
. |
+ |
. |
ID=Dca59192.1;Parent=Dca59192 |
| scaffold880 |
Augustus |
exon |
16438 |
16445 |
. |
+ |
. |
ID=Dca59192.1.exon1;Parent=Dca59192.1 |
| scaffold880 |
Augus-PASA |
exon |
16612 |
16909 |
. |
+ |
. |
ID=Dca59192.1.exon2;Parent=Dca59192.1 |
| scaffold880 |
Augus-PASA |
exon |
17118 |
17183 |
. |
+ |
. |
ID=Dca59192.1.exon3;Parent=Dca59192.1 |
| scaffold880 |
Augus-PASA |
exon |
17395 |
17454 |
. |
+ |
. |
ID=Dca59192.1.exon4;Parent=Dca59192.1 |
