Carnation DB

Dca5920.1

Annotation

5-exons
f-1
sp|A5C3C8_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#ORFNames=VITISV_038058#GO:0004523;GO:0003723;GO:0003964;GO:0015074;GO:0006278#3F2P0C
Os08t0177800-00 Similar to RNase H domain-containing protein.
Repeat List (scaffold123)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca5920.1	71	450	450	37.11	380	43	2e-76
Target_name	Start	End	Length	Cov(%)
sp\|A5C3C8_VITVI	262	616	890	39.88

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca5920.1	142	286	450	10.44	145	32	4e-10
Target_name	Start	End	Length	Cov(%)
Os08t0177800-00	202	348	352	41.76

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold123	Augustus	mRNA	112365	114197	.	-	.	ID=Dca5920.1;Parent=Dca5920
scaffold123	Augustus	exon	112365	113266	.	-	.	ID=Dca5920.1.exon1;Parent=Dca5920.1
scaffold123	Augustus	exon	113333	113438	.	-	.	ID=Dca5920.1.exon2;Parent=Dca5920.1
scaffold123	Augustus	exon	113664	113814	.	-	.	ID=Dca5920.1.exon3;Parent=Dca5920.1
scaffold123	Augustus	exon	113916	114034	.	-	.	ID=Dca5920.1.exon4;Parent=Dca5920.1
scaffold123	Augustus	exon	114123	114197	.	-	.	ID=Dca5920.1.exon5;Parent=Dca5920.1