Carnation DB

Dca59200.1

Annotation

5-exons
f-1
sp|B9N3B0_POPTR#Predicted protein#Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp trichocarpa)#ORFNames=POPTRDRAFT_743590#unknown#0F0P0C
Repeat List (scaffold880)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca59200.1	3	168	220	29.09	166	36	2e-22
Target_name	Start	End	Length	Cov(%)
sp\|B9N3B0_POPTR	170	313	781	18.43

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca59200.1	15	168	220	24.09	154	33	2e-19
Target_name	Start	End	Length	Cov(%)
AT3G17700.1	183	309	764	16.62

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold880	Augustus	mRNA	79677	84858	.	+	.	ID=Dca59200.1;Parent=Dca59200
scaffold880	Augustus	exon	79677	79859	.	+	.	ID=Dca59200.1.exon1;Parent=Dca59200.1
scaffold880	Augustus	exon	80201	80314	.	+	.	ID=Dca59200.1.exon2;Parent=Dca59200.1
scaffold880	Augustus	exon	82115	82210	.	+	.	ID=Dca59200.1.exon3;Parent=Dca59200.1
scaffold880	Augustus	exon	82310	82417	.	+	.	ID=Dca59200.1.exon4;Parent=Dca59200.1
scaffold880	Augustus	exon	84697	84858	.	+	.	ID=Dca59200.1.exon5;Parent=Dca59200.1