Dca5925.1
Annotation
- 4-exons
- f-1
- sp|B9IFE9_POPTR#Predicted protein#Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp trichocarpa)#ORFNames=POPTRDRAFT_776313#unknown#0F0P0C
- AT5G50720.1 | Symbols: ATHVA22E, HVA22E | HVA22 homologue E | chr5:20633442-20634502 REVERSE LENGTH=116
- Repeat List (scaffold123)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca5925.1 |
1 |
115 |
120 |
70.83 |
115 |
73 |
3e-45
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|B9IFE9_POPTR |
1 |
118 |
175 |
67.42 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca5925.1 |
1 |
110 |
120 |
67.5 |
110 |
74 |
3e-44
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| AT5G50720.1 |
1 |
110 |
116 |
94.82 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold123 |
Augus-PASA |
mRNA |
189389 |
191115 |
. |
+ |
. |
ID=Dca5925.1;Parent=Dca5925 |
| scaffold123 |
Augus-PASA |
exon |
189389 |
189435 |
. |
+ |
. |
ID=Dca5925.1.exon1;Parent=Dca5925.1 |
| scaffold123 |
Augus-PASA |
exon |
190518 |
190544 |
. |
+ |
. |
ID=Dca5925.1.exon2;Parent=Dca5925.1 |
| scaffold123 |
Augus-PASA |
exon |
190708 |
190830 |
. |
+ |
. |
ID=Dca5925.1.exon3;Parent=Dca5925.1 |
| scaffold123 |
Augus-PASA |
exon |
190950 |
191115 |
. |
+ |
. |
ID=Dca5925.1.exon4;Parent=Dca5925.1 |
