Carnation DB

Dca5933.1

Annotation

5-exons
f-1
sp|A0FD17_BETVU#NBS-LRR type resistance protein#Beta vulgaris (Sugar beet)#unknown#GO:0043531;GO:0006952#1F1P0C
Repeat List (scaffold123)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca5933.1	990	1109	1490	2.75	120	34	9e-06
Target_name	Start	End	Length	Cov(%)
sp\|A0FD17_BETVU	960	1066	1067	10.02

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca5933.1	1155	1482	1490	14.76	328	61	4e-109
Target_name	Start	End	Length	Cov(%)
AT3G19120.1	17	376	446	80.71

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold123	Augustus	mRNA	242765	249194	.	-	.	ID=Dca5933.1;Parent=Dca5933
scaffold123	Augustus	exon	242765	243468	.	-	.	ID=Dca5933.1.exon1;Parent=Dca5933.1
scaffold123	Augustus	exon	243570	243876	.	-	.	ID=Dca5933.1.exon2;Parent=Dca5933.1
scaffold123	Augustus	exon	243979	244078	.	-	.	ID=Dca5933.1.exon3;Parent=Dca5933.1
scaffold123	Augustus	exon	245526	247210	.	-	.	ID=Dca5933.1.exon4;Parent=Dca5933.1
scaffold123	Augustus	exon	247518	249194	.	-	.	ID=Dca5933.1.exon5;Parent=Dca5933.1